The Challenge
Australia’s biodiversity crisis necessitates urgent action to deliver continental-scale monitoring and management of threatened species and ecosystems. Acoustic monitoring is set to revolutionise this by capturing a permanent, direct, scalable and objective record of the environment.
As inexpensive open-source recorders are now deployed en masse, researchers, governments, landholders and the community can use acoustics to monitor their land, understand changes to native wildlife populations and detect pests.
However, managing and analysing big acoustic data is difficult due to a lack of standardisation in methods and metadata. Siloed local data collections prevent aggregated continental-scale analysis.
Biodiversity and land managers are calling for a way to share acoustic data and tools, and to visualise and analyse data.
The Response
In Phase 1 (2021 to 2023, doi.org/10.47486/PL050), the Open Ecoacoustics project extended and generalised an existing QUT platform, the Acoustic Workbench, to open it to everyone. This platform enables the aggregation, sharing and citation of FAIR annotated datasets, species recognition algorithms (‘recognisers’), and analytical tools.
It has achieved interoperability with other systems including TERN, Atlas of Living Australia, EcoCommons and citizen science through microservices and shared tools.
The project developed a standard for ecoacoustics data and metadata to ensure data is interoperable and reusable. Training for users and the establishment of a community around ecoacoustics has helped to ensure the adoption and sustainability of these standards.
The platform supports the ingest, search and downloading of data from different devices and services using standard and common industry formats and services. A flexible backend permits data storage on different cloud services including the ARDC Nectar Research Cloud and commercial cloud storage.
Easy-to-use ecoacoustic data analysis tools allow pre-processing of data on ingestion, annotation, standardised HPC interfaces for mass data analysis, and visualisations of acoustic data.
Third-party analysis tools such as R, Python scripts, and Java can be installed using containers. Users can share analyses and metadata, including test data sets and descriptions of tunable parameters. Citizen scientists can annotate and validate analyses.
2024 to 2026: Phase 2 (doi.org/10.3565/ts8c-ee10)
The aim of the project is to make large-scale ecoacoustic monitoring simple, cost effective and routine. This requires tools, services, platforms, training, standards and expertise.
This project will contribute to the Planet RDC objectives directly by providing a national-scale ecoacoustic data infrastructure for environmental researchers, policy makers and decision makers, and research data managers. The platform will integrate with other Machine Observation Data services including camera trap data to provide a comprehensive picture of biodiversity and threatened species suitable for downstream tools and services including the generation of environmental reports and scorecards as required by land managers.
It will contribute to MADSI program objectives by providing threatened species and biodiversity data which can drive models, analytics and decision support tools. We will work closely with the EcoCommons to build a pipeline from raw data collection and analysis (Open Ecoacoustics) to modelling and decision support (EcoCommons). In addition to facilitating existing workflow through metadata, common standards and interoperability, we will investigate how new workflows, derived from researchers and stakeholder, can be supported, for example occupancy models and socio-ecological and prioritisation models.
This project will contribute to state and federal government priorities, including:
- Queensland Biodiversity Conservation Strategy
- Queensland Threatened Species Program
- NSW’s Ecological Health Performance Scorecards
- Victoria’s Protecting Victoria’s Environment – Biodiversity 2037 plan [pdf]
- Australia’s draft National Science and Research Priorities
- Australian Government Department of Climate Change, Energy, Environment and Water (DCCEEW) environment goal of improving stewardship and sustainable management of Australia’s environment, particularly the biodiversity and invasive species goals
- Australia’s Strategy for Nature 2019-2030
New system features for Open Ecoacoustics that will be developed in Phase 2 include:
- A Validation Interface: A generic validation system for expert users and citizen scientists to validate the output of automated soundscape analyses, including automated call recognisers. The interface will enable the efficient checking of automated analyses, including sorting and filtering results for checking.
- ALA and Ecocommons Integration: Facilitating data exchange with the Atlas of Living Australia, including detection histories, and with Ecocommons.
- Google Search Feature for Ecosounds Database: Extending A2O Search capabilities and access permissions for all ecoacoustic platform datasets. This will also include migration of the current GCP hosted search feature to ARDC infrastructure.
- Improved Mapping Visualisations: Clearer data coverage views. This will also be exposed as a service to support integrated views of ecoacoustic and camera trap datasets.
- AAF Integration: Enabling seamless login for Australian universities through the Australian Access Federation (AAF).
The Outcomes
Access Open Ecoacoustics.
Open Ecoacoustics supports continental-scale fauna monitoring and research, something that was previously impossible and is contributing towards a national ecosystem observatory capability.
This will revolutionise ecological research, including the management and conservation of biodiversity, threatened species and food security.
Phase 2 Outcomes
In Phase 2 (2024 – 2026), short term outcomes will be:
- community engagement
- identification of key end-to-end workflows for ecoacoustics monitoring and integration with tools
- utilisation of the platform by key landholders and researchers
- data-exchange and collaboration with ALA, EcoCommons, Biosecurity Commons and other partners holding biodiversity and threatened species observation data (data custodians and/or collectors).
Medium term outcomes:
- improved log-in options for universities
- national ecoacoustic facility
- working towards standardised practices, tools, and a platform for ecoacoustics monitoring
- broadscale use of the platform across Australia
- informing conservation management actions through ecoacoustics monitoring
- informing research through broadscale ecoacoustics monitoring
- a community of practice.
Long term outcomes:
- routine ecoacoustic monitoring to inform conservation planning, climate resilience and adaptation
- data-driven management.
Who Will Benefit
Research organisations, researchers, ecological agencies and government policy makers will benefit from the project’s core features:
The Partners
- QUT (project lead)
- ARDC
- James Cook University
- University of New England
- Terrestrial Ecosystem Research Network (TERN)
- Atlas of Living Australia (ALA)
- Parks Australia
- National Environmental Science Program (NESP)
- NSW Parks
- ACT Government – Environment, Planning and Sustainable Development Directorate, Environment, Heritage and Water Division
- ACT Parks and Conservation Service
- Queensland Department of Environment, Science and Innovation
- (QLD DESI)
- Museums Victoria
- Department of Climate Change, Energy, the Environment and Water (DCCEEW) MERIT program
- Bush Heritage
- NSW Department of Primary Industries (NSW DPI)
- Birdlife
- Australian Citizen Science Association (ACSA)
- Australian Wildlife Conservancy (AWC)
- Australian Museum and Frog ID
- WWF
- NSW Government Biodiversity Conservation Trust
- Pollination Foundation
We thank all the partners involved in Phase 1:
- QUT (project lead)
- ARDC
- Atlas of Living Australia
- TERN
- EcoCommons Australia
- BirdLife Australia
- James Cook University
- The University of Queensland
- Bush Heritage Australia
- NSW Department of Primary Industries
- Charles Sturt University
- University of New England
- Museums Victoria
- University Of Melbourne
- Queensland Parks and Wildlife Service and Partnerships
- Australian Wildlife Conservancy